CD Genomics

Whole Genome SNP Genotyping Service

Posted by CD GenomicsResponsive · Research Services and Capabilities · United States

Summary of the technology

CD Genomics provides whole-genome SNP genotyping for the overview of the entire genome by using both microarray technologies and high-throughput next-generation sequencing (NGS), enabling genome-wide discoveries and screening of the SNP loci.

CD Genomics

Description of the technology

CD Genomics provides whole-genome SNP genotyping for the overview of the entire genome by using both microarray technologies and high-throughput next-generation sequencing (NGS), enabling genome-wide discoveries and screening of the SNP loci. Genome-wide association studies with SNP markers are expected to allow identification of genetic variation that underlie complex disorders.

Microarray-based technology can interrogate over five million markers per sample for genotyping at the resolution of single nucleotides on a genome-wide scale. Our microarray-based SNP genotyping services comprise of Affymetrix SNP arrays and Illumina SNP arrays. The Affymetrix genotyping arrays on the GeneTitan instrument (Axiom array plates) and the GeneChip Scanner 3000 7G System (cartridge arrays) can be used for a variety cases - for a few and for a lot of samples, and from targeted to genome-wide applications by selecting the specific pre-designed genotyping arrays. The high density genotyping on Illumina Infinium or GoldenGate® arrays allow powerful genome-wide association studies (GWAS) and can accurately detect point mutations and copy number variants. Currently, Affymetrix offers genotyping arrays for livestock and aquaculture species (buffalo, cattle, chicken, pig, salmon and trout), crops (cotton, maize, soybean, strawberry and wheat) and biomedical and model organisms (human, dog, mouse and Arabidopsis thaliana), while Illumina markets genotyping BeadArrays for human and non-human species (cattle, dog, maize, pig and sheep). SNP array has been taken as the preferred technique in some circumstances because of its high-density, assay accuracy, simple data analysis and easy data exchange between research programs. However, these commercially available SNP arrays or chips cannot be easily modified to suit individual experimental designs. In addition, relevant research cannot be conducted for species that do not have commercially available SNP arrays/chips.

Technology Owner

CD Genomics

Small and Medium Enterprise

Related keywords

  • Biological Sciences
  • Genetic Engineering Technology
  • Genome Research
  • Genetic Engineering / Molecular Biology
  • genome
  • genotyping

About CD Genomics

Small and Medium Enterprise from United States

CD Genomics was established in 2004, we are aiming at providing the research community with high quality Next Generation Sequencing, high throughput microarray services. Due to the demand for our services has being increased; CD Genomics has already updated its technology platform to mainstream NGS and microarray instruments. At present, our senior bioinformaticians have ever viewed more than ten thousands of trace files and accumulated abundant experience with our Illumina HiSeq2000/2500, Illumia Miseq, Ion Torrent PGM, PacBio RS and ABI 3730/3730XL analyzers. We continue to work hard to offer you the same dependable services to pharmaceutical and biotech companies, as well as academia and government agencies for the purpose of satisfying all your sequencing or array needs.

https://www.cd-genomics.com/

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